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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs75801993 chr19:17200905 T/C 1.07E-6 480 16.2 15.7 19.32 KM Plot
THCA rs75802688 chr16:2944587 G/A 0.000162 485 15.2 17.13 15.4 KM Plot
THCA rs75805948 chr1:220714218 T/A 2.65E-5 484 15.83 17.23 17.17 KM Plot
THCA rs75806251 chr5:81265278 G/C 8.87E-5 486 15.9 16.3 17.97 KM Plot
THCA rs7580789 chr2:196593980 A/T 6.56E-5 484 16.08 15.7 16.4 KM Plot
THCA rs75819761 chr6:24484438 T/C 1.21E-11 482 16.37 15.22 9.35 KM Plot
THCA rs75820213 chr6:24424530 G/A 5.55E-15 488 16.37 14.85 11.07 KM Plot
THCA rs75822156 chr6:24431820 T/C 6.43E-7 477 16.33 14.9 9.25 KM Plot
THCA rs75832195 chr6:24428195 T/C 6.02E-7 482 16.23 14.9 9.25 KM Plot
THCA rs75841771 chr14:59681450 A/T 0 487 15.9 16.4 3.53 KM Plot
THCA rs75862629 chr5:96211259 A/G 3.31E-6 487 15.17 16.9 20.83 KM Plot
THCA rs75878386 chr6:24416593 A/G 4.77E-15 489 16.38 14.85 11.07 KM Plot
THCA rs75891195 chr19:58222693 T/C 2.46E-5 474 15.13 17.13 17.08 KM Plot
THCA rs7589460 chr2:48351901 A/G 1.27E-5 482 14.85 17.47 14.47 KM Plot
THCA rs7589735 chr2:29099752 C/T 9.9E-5 490 14.3 17.03 15.93 KM Plot